DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KDGLHGD
Uniprot ID:
Q86UU5
Source protein:
Gametogenetin
Source gene:
GGN
Class:
LIG_APCC_ABBAyCdc20_2
Location:
540:546
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6957
ASA_SCORE:
95.5286
COIL:
0.9351
CONS_SCORE:
0.6088
DSS_SCORE:
0.7714
HELIX:
0.0267
FCONS_SCORE:
0.8839
RIG_SCORE:
0.6056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R549H
TCGA-2W-A8YY
CESC
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.R549H
DO223732
CESC
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A537T
TCGA-32-2616
GBM
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.A537T
DO13462
GBM
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.L543V
TCGA-55-6642
LUAD
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.5654
p.L543V
DO23622
LUAD
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.5654
p.T538I
TCGA-A6-6781
COAD
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.2778
p.T538I
DO8447
COAD
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E550K
TCGA-AA-3977
COAD
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.2222
p.E550K
DO8730
COAD
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.2222
p.A552S
TCGA-D1-A101
UCEC
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1667
p.A552S
DO43955
UCEC
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R549C
TCGA-EY-A2OP
UCEC
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.R549C
DO42560
UCEC
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.T555A
TCGA-HU-A4GQ
STAD
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.T555A
DO47767
STAD
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.0833
p.V556E
TCGA-VS-A9U6
CESC
TCGA
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.V556E
DO219728
CESC
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A554T
DO230335
COCA
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1111
p.H544N
DO228474
LICA
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.7423
p.H544N
DO228806
LICA
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.7423
p.R539C
DO224764
PACA
ICGC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM00654
Small Cell Lung Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM00210
Ovarian Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM00650
Small Cell Lung Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G547S
SIDM01681
Non-Cancerous
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R532C
SIDM00217
Colorectal Carcinoma
GDSC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1111
p.R532C
ACH-000999
Colon/Colorectal Cancer
CCLE
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1111
p.R532C
SNU-1040
large_intestine
COSMIC
KDGLHGD
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with GGN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KDGLHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UU5
Gametogenetin
LIG_APCC_ABBAyCdc20_2
540:546
KDGLHGD
APC,CDC20,FZR1
0.6957
More...