DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KDLLHSE
Uniprot ID:
Q9NY27
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 2
Source gene:
PPP4R2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
356:362
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9867
ASA_SCORE:
117.8571
COIL:
0.7211
CONS_SCORE:
0.348
DSS_SCORE:
0.7782
HELIX:
0.2574
FCONS_SCORE:
1.0163
RIG_SCORE:
0.6426
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D346N
DO2401
BRCA
ICGC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.E348K
DO41542
UCEC
ICGC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E362D
SIDM00961
Ewing's Sarcoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM00530
Esophageal Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM00568
Gastric Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM00821
Kidney Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM00817
Kidney Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM00271
Gastric Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
SIDM01454
Kidney Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
OCUM-1
stomach
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
KYAE-1
oesophagus
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
CADO-ES1
bone
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E362D
MKN1
stomach
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.Q353E
SIDM01069
Non-Small Cell Lung Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.Q353E
ACH-000667
Lung Cancer
CCLE
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.Q353E
HCC-44
lung
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.N366K
SIDM01102
Non-Cancerous
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.N366K
ACH-002316
Non-Cancerous
CCLE
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.N366K
WIL2-NS
haematopoietic_and_lymphoid_tissue
COSMIC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.D350V
SIDM01617
Endometrial Carcinoma
GDSC
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D350V
ACH-000994
Endometrial/Uterine Cancer
CCLE
KDLLHSE
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with PPP4R2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KDLLHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NY27
Serine/threonine-protein phosphatase 4 regulatory subunit 2
LIG_APCC_ABBAyCdc20_2
356:362
KDLLHSE
APC,CDC20,FZR1
0.9867
More...