DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
KDRIFPD
Uniprot ID:
Q96JM7
Source protein:
Lethal
Source gene:
L3MBTL3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
592:598
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5735
ASA_SCORE:
79.4714
COIL:
0.6366
CONS_SCORE:
0.4627
DSS_SCORE:
0.4967
HELIX:
0.1766
FCONS_SCORE:
0.9349
RIG_SCORE:
0.7659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P597T
TCGA-55-7573
LUAD
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.P597T
DO23675
LUAD
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.I595M
TCGA-A5-A0G2
UCEC
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.6507
p.I595M
DO41235
UCEC
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.6507
p.R594H
TCGA-B5-A0JY
UCEC
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R594H
TCGA-CM-5861
COAD
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R594H
TCGA-IQ-7630
HNSC
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R594H
DO7918
COAD
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R594H
DO14654
HNSC
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R594H
DO43041
UCEC
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.7133
p.R599C
TCGA-BR-8296
STAD
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R599C
DO38539
STAD
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R599C
SIDM00217
Colorectal Carcinoma
GDSC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R599C
ACH-000999
Colon/Colorectal Cancer
CCLE
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R599C
SNU-1040
large_intestine
COSMIC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P606L
TCGA-EO-A22U
UCEC
TCGA
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P606L
DO43755
UCEC
ICGC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L600V
SIDM00348
Esophageal Squamous Cell Carcinoma
GDSC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.L600V
ACH-000488
Esophageal Cancer
CCLE
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.L600V
TE-11
oesophagus
COSMIC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.S601I
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.6944
p.S601I
ACH-000951
Lung Cancer
CCLE
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.6944
p.S601I
NCI-H2342
lung
COSMIC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.6944
p.P605L
SIDM01768
Melanoma
GDSC
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P605L
ACH-000899
Skin Cancer
CCLE
KDRIFPD
LIG_APCC_ABBAyCdc20_2
0.1389
Drug responses associated with L3MBTL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00951
LAML|acute_myeloid_leukaemia
p.R210W (No)
GDSC
UNC1215
6.7012
SIDM00315
GBM|glioma
p.S256P (No)
GDSC
UNC1215
11.8707
SIDM00966
OV|ovary
p.V286I (No)
GDSC
UNC1215
8.4214
SIDM00348
ESCA|oesophagus
p.L600V (Yes)
GDSC
UNC1215
10.0945
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.A287T (No)
GDSC
UNC1215
6.1158
SIDM00550
ESCA|oesophagus
p.S134F (No)
GDSC
UNC1215
10.1563
SIDM01174
CESC|cervix
p.G737E (No)
GDSC
UNC1215
17.8715
SIDM00341
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.Y301C (No)
GDSC
UNC1215
14.1371
SIDM00958
LCML|chronic_myeloid_leukaemia
p.R145W (No)
GDSC
UNC1215
3.5252
SIDM00320
LUAD|lung_NSCLC_adenocarcinoma
p.N54S (No)
GDSC
UNC1215
7.131
SIDM00711
SCLC|lung_small_cell_carcinoma
p.S579C (No)
GDSC
UNC1215
32.5494
SIDM00411
PAAD|pancreas
p.K101R (No)
GDSC
UNC1215
21.8633
SIDM00117
LUAD|lung_NSCLC_adenocarcinoma
p.E712G (No)
GDSC
UNC1215
23.4909
SIDM00117
LUAD|lung_NSCLC_adenocarcinoma
p.E712D (No)
GDSC
UNC1215
23.4909
SIDM00598
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.R145W (No)
GDSC
UNC1215
14.685
SIDM00425
OV|ovary
p.R145W (No)
GDSC
UNC1215
17.3986
SIDM00217
COREAD|large_intestine
p.R210L (No)
GDSC
UNC1215
11.3851
SIDM00217
COREAD|large_intestine
p.R372Q (No)
GDSC
UNC1215
11.3851
SIDM00217
COREAD|large_intestine
p.R599C (Yes)
GDSC
UNC1215
11.3851
SIDM00082
SKCM|melanoma
p.E53G (No)
GDSC
UNC1215
39.4978
SIDM00889
CESC|cervix
p.G136R (No)
GDSC
UNC1215
9.7675
SIDM00660
COREAD|large_intestine
p.R210W (No)
GDSC
UNC1215
15.1239
SIDM01245
ALL|lymphoblastic_leukemia
p.A58S (No)
GDSC
UNC1215
5.1078
SIDM01189
GBM|glioma
p.I388F (No)
GDSC
UNC1215
28.0837
SIDM01242
SKCM|melanoma
p.R145W (No)
GDSC
UNC1215
19.5414
SIDM00789
COREAD|large_intestine
p.P81S (No)
GDSC
UNC1215
14.2422
SIDM00789
COREAD|large_intestine
p.W415R (No)
GDSC
UNC1215
14.2422
SIDM00534
COREAD|large_intestine
p.S524Y (No)
GDSC
UNC1215
12.3123
SIDM00741
SCLC|lung_small_cell_carcinoma
p.L346H (No)
GDSC
UNC1215
7.228
SIDM01033
BLCA|bladder
p.R145W (No)
GDSC
UNC1215
9.5862
SIDM00727
LUAD|lung_NSCLC_adenocarcinoma
p.S601I (Yes)
GDSC
UNC1215
14.8032
SIDM01110
LIHC|liver
p.T746A (No)
GDSC
UNC1215
9.0866
SIDM00548
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.F298L (No)
GDSC
UNC1215
14.7152
SIDM00549
ALL|lymphoblastic_leukemia
p.P461S (No)
GDSC
UNC1215
13.2877
SIDM01130
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.I364T (No)
GDSC
UNC1215
16.4385
SIDM01259
ALL|lymphoblastic_leukemia
p.P525L (No)
GDSC
UNC1215
17.2582
SIDM01040
OV|ovary
p.R145W (No)
GDSC
UNC1215
16.2436
SIDM00659
GBM|glioma
p.R171Q (No)
GDSC
UNC1215
13.1123
SIDM01104
SKCM|melanoma
p.T644P (No)
GDSC
UNC1215
17.0795
SIDM00481
OV|ovary
p.E338K (No)
GDSC
UNC1215
19.1246
SIDM00562
BRCA|breast
p.C304F (No)
GDSC
UNC1215
14.7113
SIDM00332
BRCA|breast
p.Q352E (No)
GDSC
UNC1215
28.1858
All proteins holding degron of KDRIFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JM7
Lethal
LIG_APCC_ABBAyCdc20_2
592:598
KDRIFPD
APC,CDC20,FZR1
0.5735
More...