DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KGKVFQE
Uniprot ID:
P07711
Source protein:
Procathepsin L
Source gene:
CTSL
Class:
LIG_APCC_ABBAyCdc20_2
Location:
102:108
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9333
ASA_SCORE:
94.2571
COIL:
0.7481
CONS_SCORE:
0.3333
DSS_SCORE:
0.4135
HELIX:
0.0201
FCONS_SCORE:
0.7995
RIG_SCORE:
0.7785
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R98H
TCGA-AX-A2HA
UCEC
TCGA
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R98H
DO42504
UCEC
ICGC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R98H
ACH-001068
Lymphoma
CCLE
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.G103V
TCGA-DA-A1I1
SKCM
TCGA
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.6421
p.G103V
TCGA-FS-A1ZR
SKCM
TCGA
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.6421
p.G103V
DO37651
SKCM
ICGC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.6421
p.G103V
DO37966
SKCM
ICGC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.6421
p.E113A
TCGA-EB-A3Y6
SKCM
TCGA
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E113A
DO38081
SKCM
ICGC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R98C
DO233673
GACA
ICGC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.2222
p.S117Y
SIDM00773
Non-Cancerous
GDSC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.S117Y
SIDM00774
Breast Carcinoma
GDSC
KGKVFQE
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with CTSL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KGKVFQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07711
Procathepsin L
LIG_APCC_ABBAyCdc20_2
102:108
KGKVFQE
APC,CDC20,FZR1
0.9333
More...