DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KGKVHCD
Uniprot ID:
Q9UI33
Source protein:
Sodium channel protein type 11 subunit alpha
Source gene:
SCN11A
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1785:1791
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6822
ASA_SCORE:
98.2143
COIL:
0.6776
CONS_SCORE:
0.2613
DSS_SCORE:
0.6735
HELIX:
0.0307
FCONS_SCORE:
0.882
RIG_SCORE:
0.7585
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1780R
TCGA-05-4410
LUAD
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.1944
p.G1782R
TCGA-50-5941
LUAD
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.25
p.D1791H
TCGA-B6-A0RT
BRCA
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.7688
p.S1779T
TCGA-CC-5259
LIHC
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.1667
p.H1789Y
TCGA-FS-A1ZQ
SKCM
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.6118
p.G1776R
TCGA-FW-A3R5
SKCM
TCGA
KGKVHCD
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with SCN11A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KGKVHCD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UI33
Sodium channel protein type 11 subunit alpha
LIG_APCC_ABBAyCdc20_2
1785:1791
KGKVHCD
APC,CDC20,FZR1
0.6822
More...