DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KGNLFTD
Uniprot ID:
Q5VXU9
Source protein:
Protein shortage in chiasmata 1 ortholog
Source gene:
SHOC1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1326:1332
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6143
ASA_SCORE:
71.4857
COIL:
0.7004
CONS_SCORE:
0.4154
DSS_SCORE:
0.2428
HELIX:
0.1231
FCONS_SCORE:
0.8507
RIG_SCORE:
0.7705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1337P
SIDM00513
Non-Small Cell Lung Carcinoma
GDSC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L1337P
COR-L105
lung
COSMIC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L1322W
SIDM01051
Ovarian Carcinoma
GDSC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.L1322W
EFO-27
ovary
COSMIC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.S1330T
HT55
large_intestine
COSMIC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.7116
p.S1330A
HEC-1
endometrium
COSMIC
KGNLFTD
LIG_APCC_ABBAyCdc20_2
0.7588
Drug responses associated with SHOC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KGNLFTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VXU9
Protein shortage in chiasmata 1 ortholog
LIG_APCC_ABBAyCdc20_2
1326:1332
KGNLFTD
APC,CDC20,FZR1
0.6143
More...