DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KGRIHPE
Uniprot ID:
Q8IZT8
Source protein:
Heparan sulfate glucosamine 3-O-sulfotransferase 5
Source gene:
HS3ST5
Class:
LIG_APCC_ABBAyCdc20_2
Location:
309:315
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6763
ASA_SCORE:
93.1143
COIL:
0.9219
CONS_SCORE:
0.5783
DSS_SCORE:
0.1459
HELIX:
0.018
FCONS_SCORE:
1.2573
RIG_SCORE:
0.7482
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K309T
TCGA-B5-A3FA
UCEC
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7306
p.K309T
DO52402
UCEC
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7306
p.R311C
SIDM02059
Colorectal Carcinoma
GDSC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.719
p.R311H
TCGA-86-8075
LUAD
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
TCGA-AP-A1DV
UCEC
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
DO224573
BRCA
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
DO1006
BRCA
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
DO25386
LUAD
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
DO43186
UCEC
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R311H
SIDM01962
Colorectal Carcinoma
GDSC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7133
p.I312T
TCGA-B5-A11E
UCEC
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7078
p.I312T
DO41644
UCEC
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.7078
p.P314L
TCGA-FR-A3YO
SKCM
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6471
p.P314L
DO229177
LMS
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6471
p.P314L
DO37419
SKCM
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6471
p.R311S
TCGA-69-7980
LUAD
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6316
p.R311S
DO23678
LUAD
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6316
p.R311S
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6316
p.R311S
ACH-001363
Lung Cancer
CCLE
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6316
p.R311S
NCI-H2135
lung
COSMIC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.6316
p.P314S
DO229177
LMS
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.5641
p.S308I
TCGA-86-8358
LUAD
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.S308I
DO25471
LUAD
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.K303R
TCGA-18-3409
LUSC
TCGA
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.2778
p.K303R
DO26444
LUSC
ICGC
KGRIHPE
LIG_APCC_ABBAyCdc20_2
0.2778
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Drug responses associated with HS3ST5 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of KGRIHPE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZT8
Heparan sulfate glucosamine 3-O-sulfotransferase 5
LIG_APCC_ABBAyCdc20_2
309:315
KGRIHPE
APC,CDC20,FZR1
0.6763
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