DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KHVVFLE
Uniprot ID:
Q86WK7
Source protein:
Amphoterin-induced protein 3
Source gene:
AMIGO3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
452:458
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9548
ASA_SCORE:
71.3
COIL:
0.6351
CONS_SCORE:
0.8698
DSS_SCORE:
0.4118
HELIX:
0.0293
FCONS_SCORE:
1.4237
RIG_SCORE:
0.8086
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K447N
TCGA-A5-A0G1
UCEC
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.3056
p.K447N
DO42472
UCEC
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.3056
p.V454I
TCGA-A5-A0G2
UCEC
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.5965
p.V454I
DO41235
UCEC
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.5965
p.V454I
SIDM01612
Endometrial Carcinoma
GDSC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.5965
p.V454I
ACH-000946
Endometrial/Uterine Cancer
CCLE
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.5965
p.R461W
TCGA-A5-A0VP
UCEC
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.25
p.R461W
DO42600
UCEC
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.25
p.N465S
TCGA-BQ-5888
KIRP
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.N465S
DO20772
KIRP
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.H453Y
TCGA-DF-A2KN
UCEC
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H453Y
DO223282
UCEC
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.6118
p.V468M
TCGA-DF-A2KU
UCEC
TCGA
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V468M
DO223286
UCEC
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R461Q
DO230335
COCA
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.25
p.P444R
DO46538
OV
ICGC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R446C
SIDM00602
Gastric Carcinoma
GDSC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R446C
ACH-000919
Gastric Cancer
CCLE
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R446C
IM-95
stomach
COSMIC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R446H
SIDM00213
Thyroid Gland Carcinoma
GDSC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R446H
ACH-000903
Thyroid Cancer
CCLE
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R446H
FTC-133
thyroid
COSMIC
KHVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with AMIGO3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KHVVFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86WK7
Amphoterin-induced protein 3
LIG_APCC_ABBAyCdc20_2
452:458
KHVVFLE
APC,CDC20,FZR1
0.9548
More...