DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KIDSTPVK
Uniprot ID:
Q9H0U4
Source protein:
Ras-related protein Rab-1B
Source gene:
RAB1B
Class:
DEG_SCF_SKP2-CKS1_1
Location:
187:194
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9943
ASA_SCORE:
102.8
COIL:
0.9366
CONS_SCORE:
0.4188
DSS_SCORE:
0.5862
HELIX:
0.0179
FCONS_SCORE:
0.957
RIG_SCORE:
0.7026
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C200S
TCGA-58-8388
LUSC
TCGA
KIDSTPVK
DEG_SCF_SKP2-CKS1_1
0.1667
p.E182K
TCGA-C5-A901
CESC
TCGA
KIDSTPVK
DEG_SCF_SKP2-CKS1_1
0.1944
p.R183W
TCGA-UD-AAC1
MESO
TCGA
KIDSTPVK
DEG_SCF_SKP2-CKS1_1
0.2222
Drug responses associated with RAB1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KIDSTPVK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0U4
Ras-related protein Rab-1B
DEG_SCF_SKP2-CKS1_1
187:194
KIDSTPVK
SKP2,CSK1
0.9943
More...
Q92928
Putative Ras-related protein Rab-1C
DEG_SCF_SKP2-CKS1_1
187:194
KIDSTPVK
SKP2,CSK1
0.9794
More...