DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KITLYED
Uniprot ID:
P07320
Source protein:
Gamma-crystallin D
Source gene:
CRYGD
Class:
LIG_APCC_ABBAyCdc20_2
Location:
3:9
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.731
ASA_SCORE:
44.6857
COIL:
0.1831
CONS_SCORE:
0.8314
DSS_SCORE:
0.5859
HELIX:
0.0024
FCONS_SCORE:
0.9406
RIG_SCORE:
0.808
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E18K
TCGA-AJ-A3EL
UCEC
TCGA
KITLYED
LIG_APCC_ABBAyCdc20_2
0.0833
p.E18K
DO41542
UCEC
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.0833
p.L6P
TCGA-D3-A1QB
SKCM
TCGA
KITLYED
LIG_APCC_ABBAyCdc20_2
0.7582
p.L6P
DO47573
SKCM
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.7582
p.L6I
TCGA-FS-A1ZZ
SKCM
TCGA
KITLYED
LIG_APCC_ABBAyCdc20_2
0.6063
p.L6I
DO37412
SKCM
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.6063
p.K3N
DO228276
BRCA
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.6918
p.G2W
DO230347
COCA
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.3056
p.R15H
DO234372
ESAD
ICGC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.1667
p.I4M
SIDM01494
Glioblastoma
GDSC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.6507
p.I4M
ACH-000445
Brain Cancer
CCLE
KITLYED
LIG_APCC_ABBAyCdc20_2
0.6507
p.R10W
ACH-002659
Colon/Colorectal Cancer
CCLE
KITLYED
LIG_APCC_ABBAyCdc20_2
0.3056
p.T5P
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
KITLYED
LIG_APCC_ABBAyCdc20_2
0.5919
Drug responses associated with CRYGD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KITLYED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07320
Gamma-crystallin D
LIG_APCC_ABBAyCdc20_2
3:9
KITLYED
APC,CDC20,FZR1
0.731
More...