DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKKIHQE
Uniprot ID:
Q1ED39
Source protein:
Lysine-rich nucleolar protein 1
Source gene:
KNOP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
215:221
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8868
ASA_SCORE:
127.5714
COIL:
0.7611
CONS_SCORE:
0.4634
DSS_SCORE:
0.8024
HELIX:
0.1004
FCONS_SCORE:
1.1268
RIG_SCORE:
0.6416
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q220R
TCGA-AP-A1DK
UCEC
TCGA
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6218
p.Q220R
DO42033
UCEC
ICGC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6218
p.R206G
TCGA-CD-A4MG
STAD
TCGA
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R206G
DO48009
STAD
ICGC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R206K
TCGA-EY-A215
UCEC
TCGA
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R206K
DO42665
UCEC
ICGC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.0833
p.G222V
DO231596
LINC
ICGC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.3056
p.H219Y
SIDM00455
Pancreatic Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00831
Head and Neck Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00042
Pancreatic Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00104
Mesothelioma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00669
Pancreatic Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00091
Ovarian Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00529
Breast Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.H219Y
SIDM00467
Acute Myeloid Leukemia
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.6118
p.I218F
SIDM01451
Pancreatic Carcinoma
GDSC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.7415
p.N209S
NCI-H1417
lung
COSMIC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.1667
p.H219N
AN3-CA
endometrium
COSMIC
KKKIHQE
LIG_APCC_ABBAyCdc20_2
0.7423
Drug responses associated with KNOP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKKIHQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q1ED39
Lysine-rich nucleolar protein 1
LIG_APCC_ABBAyCdc20_2
215:221
KKKIHQE
APC,CDC20,FZR1
0.8868
More...