DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
KKNLHGD
Uniprot ID:
Q9H0V9
Source protein:
VIP36-like protein
Source gene:
LMAN2L
Class:
LIG_APCC_ABBAyCdc20_2
Location:
122:128
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.814
ASA_SCORE:
79.4571
COIL:
0.781
CONS_SCORE:
0.4904
DSS_SCORE:
0.2009
HELIX:
0.0796
FCONS_SCORE:
0.8001
RIG_SCORE:
0.7231
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G121A
TCGA-3A-A9IU
PAAD
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.K136M
TCGA-86-8279
LUAD
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.2222
p.Y134C
TCGA-94-7557
LUSC
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R138L
TCGA-BF-A1PZ
SKCM
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.0556
p.K123N
TCGA-BS-A0TC
UCEC
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.5806
p.F115L
TCGA-EY-A1G8
UCEC
TCGA
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.F115L
DO43578
UCEC
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.1389
p.L131F
DO44038
BLCA
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.I117V
DO233831
GACA
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.1944
p.H118N
DO229045
LICA
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.2222
p.D131N
DO24940
LUAD
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.25
p.D127A
DO42673
UCEC
ICGC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.7793
p.G129S
SIDM00113
Kidney Carcinoma
GDSC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G129S
ACH-001208
Kidney Cancer
CCLE
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.G129S
TK10
kidney
COSMIC
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.3056
p.V113G
ACH-000463
Lung Cancer
CCLE
KKNLHGD
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with LMAN2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKNLHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0V9
VIP36-like protein
LIG_APCC_ABBAyCdc20_2
122:128
KKNLHGD
APC,CDC20,FZR1
0.814
More...