DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KKVLHFD
Uniprot ID:
P29508
Source protein:
Serpin B3
Source gene:
SERPINB3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
54:60
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8963
ASA_SCORE:
68.0429
COIL:
0.5983
CONS_SCORE:
0.4693
DSS_SCORE:
0.3285
HELIX:
0.3883
FCONS_SCORE:
1.2481
RIG_SCORE:
0.8753
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N48K
TCGA-50-5930
LUAD
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1667
p.N48K
DO25189
LUAD
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1667
p.G44V
TCGA-53-7626
LUAD
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G44V
DO23774
LUAD
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G68E
TCGA-AX-A3FS
UCEC
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
DO220899
MELA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
DO40879
UCEC
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
SIDM00437
Acute Myeloid Leukemia
GDSC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
SIDM00523
Small Cell Lung Carcinoma
GDSC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
ACH-000362
Leukemia
CCLE
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
ACH-000698
Lung Cancer
CCLE
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
ACH-001574
Leukemia
CCLE
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
DMS-53
lung
COSMIC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G68E
MOLM-13
haematopoietic_and_lymphoid_tissue
COSMIC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L57P
TCGA-BS-A0UF
UCEC
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.7582
p.L57P
DO41488
UCEC
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.7582
p.L57I
TCGA-E6-A1LX
UCEC
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.6063
p.L57I
DO41020
UCEC
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.6063
p.G44A
TCGA-EE-A20C
SKCM
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G44A
DO47665
SKCM
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G44R
TCGA-EE-A20C
SKCM
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.G44R
DO47665
SKCM
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.L57F
TCGA-EO-A22R
UCEC
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.6981
p.L57F
DO229479
SKCA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.6981
p.L57F
DO42713
UCEC
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.6981
p.E64K
TCGA-ER-A19E
SKCM
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.2222
p.E64K
DO47542
SKCM
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.2222
p.A70T
TCGA-W3-AA1R
SKCM
TCGA
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A70T
DO51275
SKCM
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.T49A
DO227906
COCA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.N65K
DO228985
LICA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.N65K
DO229031
LICA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.N65K
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.N65K
ACH-000912
Lung Cancer
CCLE
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.G44T
DO222775
MELA
ICGC
KKVLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with SERPINB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKVLHFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29508
Serpin B3
LIG_APCC_ABBAyCdc20_2
54:60
KKVLHFD
APC,CDC20,FZR1
0.8963
More...