DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KLDSTPLK
Uniprot ID:
O75449
Source protein:
Katanin p60 ATPase-containing subunit A1
Source gene:
KATNA1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
77:84
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9799
ASA_SCORE:
101.8
COIL:
0.7965
CONS_SCORE:
0.327
DSS_SCORE:
0.4028
HELIX:
0.1839
FCONS_SCORE:
0.8128
RIG_SCORE:
0.7481
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D89E
TCGA-12-0778
GBM
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.D89E
DO11411
GBM
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.E94D
TCGA-4Z-AA7O
BLCA
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94D
DO51865
BLCA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94Q
TCGA-4Z-AA7W
BLCA
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94Q
DO218984
BLCA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94Q
ACH-001699
Head and Neck Cancer
CCLE
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94G
TCGA-HU-A4GT
STAD
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E94G
DO48020
STAD
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
p.P82L
TCGA-YD-A89C
SKCM
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.7582
p.P82L
DO219501
SKCM
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.7582
p.D79H
TCGA-ZF-AA54
BLCA
TCGA
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.7688
p.D79H
DO219098
BLCA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.7688
p.H88N
DO228976
LICA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A85E
DO229034
LICA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.3056
p.S75I
DO233295
NACA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.2778
p.A86T
DO233299
NACA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.2778
p.H88R
DO229253
THCA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A85S
DO229232
THCA
ICGC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A85V
SIDM00379
Glioma
GDSC
KLDSTPLK
DEG_SCF_SKP2-CKS1_1
0.3056
Drug responses associated with KATNA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KLDSTPLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75449
Katanin p60 ATPase-containing subunit A1
DEG_SCF_SKP2-CKS1_1
77:84
KLDSTPLK
SKP2,CSK1
0.9799
More...