DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KLFLHLE
Uniprot ID:
Q8N5Y2
Source protein:
Male-specific lethal 3 homolog
Source gene:
MSL3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
383:389
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9139
ASA_SCORE:
88.1571
COIL:
0.4531
CONS_SCORE:
0.3414
DSS_SCORE:
0.6326
HELIX:
0.3656
FCONS_SCORE:
1.0511
RIG_SCORE:
0.7315
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D376N
TCGA-B0-4852
KIRC
TCGA
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A379T
TCGA-B5-A3FC
UCEC
TCGA
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2222
p.A379T
DO41871
UCEC
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2222
p.S399F
TCGA-BR-7717
STAD
TCGA
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.5
p.K391E
TCGA-DK-A1A7
BLCA
TCGA
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S380I
TCGA-DU-6392
LGG
TCGA
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.25
p.S380I
DO22237
LGG
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.25
p.S391G
DO483
BLCA
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2778
p.E377Q
DO225207
BRCA
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.K396N
DO14766
HNSC
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.5833
p.F393L
DO22403
LGG
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2222
p.M381I
DO229034
LICA
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2778
p.T380I
DO35642
PBCA
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.25
p.P398L
DO47619
SKCM
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.5278
p.S387F
DO38412
STAD
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.7982
p.P391T
DO231338
THCA
ICGC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.2778
p.P389H
HEC-1
endometrium
COSMIC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.7694
p.P394A
SW948
large_intestine
COSMIC
KLFLHLE
LIG_APCC_ABBAyCdc20_2
0.1944
Drug responses associated with MSL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KLFLHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5Y2
Male-specific lethal 3 homolog
LIG_APCC_ABBAyCdc20_2
383:389
KLFLHLE
APC,CDC20,FZR1
0.9139
More...