DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KLVVFKE
Uniprot ID:
Q86VP3
Source protein:
Phosphofurin acidic cluster sorting protein 2
Source gene:
PACS2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
48:54
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8053
ASA_SCORE:
53.0857
COIL:
0.1676
CONS_SCORE:
0.4939
DSS_SCORE:
0.0151
HELIX:
0.006
FCONS_SCORE:
0.8577
RIG_SCORE:
0.9638
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S61F
TCGA-21-1079
LUSC
TCGA
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.S61F
TCGA-D3-A2JD
SKCM
TCGA
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.S61F
DO26846
LUSC
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.S61F
DO37543
SKCM
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.V63M
DO223703
COAD
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.0833
p.T45P
DO218031
GACA
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.25
p.T45P
DO218243
GACA
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.25
p.Q58H
DO229037
LICA
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.2222
p.L44M
DO23464
LINC
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.2222
p.C51Y
DO229177
LMS
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.7087
p.D61Y
DO23631
LUAD
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.P42S
DO222670
MELA
ICGC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E58Q
SIDM01700
Hodgkin's Lymphoma
GDSC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.2222
p.K43N
SJRH30
soft_tissue
COSMIC
KLVVFKE
LIG_APCC_ABBAyCdc20_2
0.6389
Drug responses associated with PACS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KLVVFKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86VP3
Phosphofurin acidic cluster sorting protein 2
LIG_APCC_ABBAyCdc20_2
48:54
KLVVFKE
APC,CDC20,FZR1
0.8053
More...