DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
KNHVYGE
Uniprot ID:
Q9HAZ2
Source protein:
Histone-lysine N-methyltransferase PRDM16
Source gene:
PRDM16
Class:
LIG_APCC_ABBAyCdc20_2
Location:
824:830
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.897
ASA_SCORE:
99.4857
COIL:
0.7326
CONS_SCORE:
0.4066
DSS_SCORE:
0.6572
HELIX:
0.0441
FCONS_SCORE:
1.4075
RIG_SCORE:
0.6824
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R820W
TCGA-EY-A1H0
UCEC
TCGA
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.2222
p.E838K
DO233088
GACA
ICGC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.V828F
DO229028
LICA
ICGC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.7068
p.R821W
DO43114
UCEC
ICGC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.25
p.G818S
SIDM00427
Ewing's Sarcoma
GDSC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.G818S
SIDM00678
Bladder Carcinoma
GDSC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1667
p.G817S
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A835T
ACH-000019
Breast Cancer
CCLE
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.A835T
ACH-000028
Breast Cancer
CCLE
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.1944
p.H826R
ACH-001518
Endometrial/Uterine Cancer
CCLE
KNHVYGE
LIG_APCC_ABBAyCdc20_2
0.7133
Drug responses associated with PRDM16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KNHVYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HAZ2
Histone-lysine N-methyltransferase PRDM16
LIG_APCC_ABBAyCdc20_2
824:830
KNHVYGE
APC,CDC20,FZR1
0.897
More...