DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KNPLYVE
Uniprot ID:
Q9C0I1
Source protein:
Myotubularin-related protein 12
Source gene:
MTMR12
Class:
LIG_APCC_ABBAyCdc20_2
Location:
537:543
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9816
ASA_SCORE:
50.9143
COIL:
0.8049
CONS_SCORE:
0.6539
DSS_SCORE:
0.4079
HELIX:
0.0479
FCONS_SCORE:
1.3779
RIG_SCORE:
0.8179
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E529K
TCGA-44-7667
LUAD
TCGA
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E529K
DO23830
LUAD
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q527P
TCGA-A8-A07G
BRCA
TCGA
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q527P
DO2870
BRCA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0556
p.L547M
TCGA-AG-3892
READ
TCGA
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.L547M
DO229038
LICA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.L547M
DO36394
READ
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.Q533H
TCGA-AP-A1DV
UCEC
TCGA
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.Q533H
DO43186
UCEC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P530R
DO52544
BRCA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1389
p.L536F
DO223562
CLLE
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R540I
DO7783
COAD
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.8102
p.R540I
DO43041
UCEC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.8102
p.R540I
HCC2998
large_intestine
COSMIC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.8102
p.S547Y
DO8264
COAD
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.I537S
DO10880
GBM
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.7341
p.D549H
DO15791
HNSC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2778
p.Q551K
DO229027
LICA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1111
p.T529K
DO229032
LICA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1111
p.T550A
DO49715
LIHC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G544C
DO230538
LUSC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.75
p.E527K
DO34048
PACA
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R535C
DO51407
PRAD
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2778
p.L544F
DO42280
UCEC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.75
p.I542T
DO41584
UCEC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.7078
p.S547F
DO43755
UCEC
ICGC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R552W
SIDM00214
Colorectal Carcinoma
GDSC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R552W
SNU-407
large_intestine
COSMIC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0833
p.L551V
KYSE-450
oesophagus
COSMIC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E527G
SNU-1040
large_intestine
COSMIC
KNPLYVE
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with MTMR12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KNPLYVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0I1
Myotubularin-related protein 12
LIG_APCC_ABBAyCdc20_2
537:543
KNPLYVE
APC,CDC20,FZR1
0.9816
More...