DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KNPVFDD
Uniprot ID:
Q9NZ52
Source protein:
ADP-ribosylation factor-binding protein GGA3
Source gene:
GGA3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
165:171
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9387
ASA_SCORE:
103.1
COIL:
0.91
CONS_SCORE:
0.4024
DSS_SCORE:
0.6898
HELIX:
0.0781
FCONS_SCORE:
0.9671
RIG_SCORE:
0.6697
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P162L
TCGA-AP-A1DK
UCEC
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.25
p.K176E
TCGA-BR-A4QL
STAD
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.6389
p.L156P
TCGA-CM-6162
COAD
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P167S
TCGA-EB-A5UN
SKCM
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.5641
p.P167S
TCGA-GN-A8LK
SKCM
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.5641
p.E172K
TCGA-FU-A40J
CESC
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.L156M
TCGA-IB-7651
PAAD
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P160S
TCGA-OL-A66N
BRCA
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D170H
TCGA-P4-A5EA
KIRP
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.6577
p.S175C
TCGA-S5-AA26
BLCA
TCGA
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.2222
p.L163V
DO52666
MALY
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R181H
DO41903
UCEC
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R181H
DO41847
UCEC
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R174W
DO42560
UCEC
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.6944
p.R174W
DO42793
UCEC
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.6944
p.V168M
DO41361
UCEC
ICGC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.6097
p.D170N
ACH-000960
Leukemia
CCLE
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.5821
p.D170N
REH
haematopoietic_and_lymphoid_tissue
COSMIC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.5821
p.R173K
SF539
central_nervous_system
COSMIC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R166W
EB2
haematopoietic_and_lymphoid_tissue
COSMIC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.8634
p.R181C
HCC1500
breast
COSMIC
KNPVFDD
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with GGA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KNPVFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZ52
ADP-ribosylation factor-binding protein GGA3
LIG_APCC_ABBAyCdc20_2
165:171
KNPVFDD
APC,CDC20,FZR1
0.9387
More...