DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KNSLHLD
Uniprot ID:
Q9H2B2
Source protein:
Synaptotagmin-4
Source gene:
SYT4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
89:95
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8521
ASA_SCORE:
96.1143
COIL:
0.787
CONS_SCORE:
0.3516
DSS_SCORE:
0.5785
HELIX:
0.1821
FCONS_SCORE:
0.7248
RIG_SCORE:
0.7342
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A86V
TCGA-55-7995
LUAD
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.P88Q
TCGA-55-8616
LUAD
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.L92M
TCGA-85-6560
LUSC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.5999
p.K89N
TCGA-AA-A010
COAD
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K89N
TCGA-AP-A1E0
UCEC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K89N
TCGA-D1-A17Q
UCEC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K89N
SIDM00193
Colorectal Carcinoma
GDSC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K89N
ACH-000991
Colon/Colorectal Cancer
CCLE
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K89N
SNU-81
large_intestine
COSMIC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6918
p.D100Y
TCGA-AG-A002
READ
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.K82N
TCGA-BK-A6W3
UCEC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.L101I
TCGA-CR-7367
HNSC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1667
p.K98N
TCGA-CV-A45O
HNSC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.3611
p.L94M
TCGA-DF-A2KU
UCEC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.5999
p.S91L
TCGA-EE-A29E
SKCM
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6556
p.P88S
TCGA-EO-A22U
UCEC
TCGA
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P88S
DO222542
MELA
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P88S
DO51286
SKCM
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.T104N
DO844
BLCA
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0833
p.L100M
DO7783
COAD
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L100M
DO42568
UCEC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.P105S
DO230346
COCA
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0556
p.K80N
DO49044
HNSC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0833
p.L83I
DO15999
HNSC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1667
p.G95S
DO219230
KIRC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6993
p.N102I
DO22941
LIHC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1389
p.N102I
DO22857
LIHC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P105T
DO25767
LUAD
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0556
p.P105Q
DO218940
LUAD
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0556
p.L100Q
DO26230
LUAD
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D99N
DO222908
MELA
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P94S
DO42665
UCEC
ICGC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.6752
p.K82E
SIDM01293
Colorectal Carcinoma
GDSC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.E97Q
SIDM00414
Bladder Carcinoma
GDSC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E97Q
ACH-000545
Bladder Cancer
CCLE
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E97Q
VM-CUB-1
urinary_tract
COSMIC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.2778
p.L92S
SIDM00936
Bladder Carcinoma
GDSC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.7667
p.L92S
ACH-000142
Bladder Cancer
CCLE
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.7667
p.L92S
CAL-29
urinary_tract
COSMIC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.7667
p.E79Q
VM-CUB-1
urinary_tract
COSMIC
KNSLHLD
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with SYT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KNSLHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H2B2
Synaptotagmin-4
LIG_APCC_ABBAyCdc20_2
89:95
KNSLHLD
APC,CDC20,FZR1
0.8521
More...