DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KPALFPE
Uniprot ID:
Q96JM3
Source protein:
Chromosome alignment-maintaining phosphoprotein 1
Source gene:
CHAMP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
527:533
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9989
ASA_SCORE:
103.2
COIL:
0.9577
CONS_SCORE:
0.6576
DSS_SCORE:
0.675
HELIX:
0.0196
FCONS_SCORE:
1.1424
RIG_SCORE:
0.6664
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A529V
TCGA-AH-6643
READ
TCGA
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.5825
p.A529V
DO36591
READ
ICGC
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.5825
p.P532S
TCGA-EE-A3AF
SKCM
TCGA
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.5641
p.P532S
DO37911
SKCM
ICGC
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.5641
p.D522N
TCGA-EO-A22S
UCEC
TCGA
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D522N
DO41590
UCEC
ICGC
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P517R
DO222857
BTCA
ICGC
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.T523I
DO230342
COCA
ICGC
KPALFPE
LIG_APCC_ABBAyCdc20_2
0.2222
Drug responses associated with CHAMP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KPALFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JM3
Chromosome alignment-maintaining phosphoprotein 1
LIG_APCC_ABBAyCdc20_2
527:533
KPALFPE
APC,CDC20,FZR1
0.9989
More...