DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KPHAGVSPR
Uniprot ID:
Q5VWQ0
Source protein:
Lysine-specific demethylase 9
Source gene:
RSBN1
Class:
DEG_SIAH_1
Location:
75:83
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.7751
ASA_SCORE:
87.8333
COIL:
0.8083
CONS_SCORE:
0.452
DSS_SCORE:
0.8065
HELIX:
0.0377
FCONS_SCORE:
0.9708
RIG_SCORE:
0.5961
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q88K
TCGA-55-7910
LUAD
TCGA
KPHAGVSPR
DEG_SIAH_1
0.1944
p.Q88K
DO23669
LUAD
ICGC
KPHAGVSPR
DEG_SIAH_1
0.1944
p.V85A
TCGA-86-A4JF
LUAD
TCGA
KPHAGVSPR
DEG_SIAH_1
0.2778
p.V85A
DO45317
LUAD
ICGC
KPHAGVSPR
DEG_SIAH_1
0.2778
p.V85L
TCGA-DD-AACI
LIHC
TCGA
KPHAGVSPR
DEG_SIAH_1
0.2778
p.V85L
DO52205
LIHC
ICGC
KPHAGVSPR
DEG_SIAH_1
0.2778
p.P68S
DO233764
GACA
ICGC
KPHAGVSPR
DEG_SIAH_1
0.1389
p.S91F
SIDM01265
Plasma Cell Myeloma
GDSC
KPHAGVSPR
DEG_SIAH_1
0.5556
p.S91F
ACH-000763
Myeloma
CCLE
KPHAGVSPR
DEG_SIAH_1
0.5556
p.S91F
MM1S
haematopoietic_and_lymphoid_tissue
COSMIC
KPHAGVSPR
DEG_SIAH_1
0.5556
p.R89L
SIDM00541
Colorectal Carcinoma
GDSC
KPHAGVSPR
DEG_SIAH_1
0.1667
p.R89L
ACH-000926
Colon/Colorectal Cancer
CCLE
KPHAGVSPR
DEG_SIAH_1
0.1667
p.R89L
HT55
large_intestine
COSMIC
KPHAGVSPR
DEG_SIAH_1
0.1667
p.H80R
EN
endometrium
COSMIC
KPHAGVSPR
DEG_SIAH_1
0.8244
p.S89F
NCI-H187
lung
COSMIC
KPHAGVSPR
DEG_SIAH_1
0.1667
Drug responses associated with RSBN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KPHAGVSPR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VWQ0
Lysine-specific demethylase 9
DEG_SIAH_1
75:83
KPHAGVSPR
SIAH1,SIAH2,SIAH3
0.7751
More...