DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KPHMHTD
Uniprot ID:
P55196
Source protein:
Afadin
Source gene:
AFDN
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1255:1261
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9726
ASA_SCORE:
111.7
COIL:
0.9433
CONS_SCORE:
0.2549
DSS_SCORE:
0.6864
HELIX:
0.0407
FCONS_SCORE:
0.8952
RIG_SCORE:
0.6059
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1250L
SIDM00384
B-Cell Non-Hodgkin's Lymphoma
GDSC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R1250L
SCC-3
haematopoietic_and_lymphoid_tissue
COSMIC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1944
p.M1263T
SIDM00685
Glioblastoma
GDSC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.2778
p.M1263T
LN-18
central_nervous_system
COSMIC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R1248W
SIDM00217
Colorectal Carcinoma
GDSC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R1248W
SNU-1040
large_intestine
COSMIC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1389
p.S1268N
SIDM01608
Endometrial Carcinoma
GDSC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1389
p.M1249I
HL-60
haematopoietic_and_lymphoid_tissue
COSMIC
KPHMHTD
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with AFDN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KPHMHTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55196
Afadin
LIG_APCC_ABBAyCdc20_2
1255:1261
KPHMHTD
APC,CDC20,FZR1
0.9726
More...