DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KPSLFSD
Uniprot ID:
Q13950
Source protein:
Runt-related transcription factor 2
Source gene:
RUNX2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
238:244
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8937
ASA_SCORE:
62
COIL:
0.7623
CONS_SCORE:
0.265
DSS_SCORE:
0.6122
HELIX:
0.1766
FCONS_SCORE:
0.7569
RIG_SCORE:
0.6702
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S247I
TCGA-56-7731
LUSC
TCGA
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.6944
p.R245L
TCGA-97-A4M7
LUAD
TCGA
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R251C
TCGA-AP-A1DV
UCEC
TCGA
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R251H
TCGA-AX-A1C5
UCEC
TCGA
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R251H
TCGA-XK-AAIW
PRAD
TCGA
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R237Q
DO2937
BRCA
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.75
p.R237Q
DO222628
MELA
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.75
p.R237Q
DO37539
SKCM
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.75
p.R254I
DO2401
BRCA
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R237W
DO10020
COAD
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.75
p.D229N
DO9876
COAD
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.V242F
DO229018
LICA
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.7068
p.Q246K
DO28923
OV
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.2778
p.Q246K
DO37405
SKCM
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D252N
DO36881
READ
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1111
p.D252N
DO42713
UCEC
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1111
p.N231K
DO43041
UCEC
ICGC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R229G
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R229G
NCI-H1651
lung
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P253L
SIDM00928
Breast Carcinoma
GDSC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P253L
ACH-000857
Breast Cancer
CCLE
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P253L
CAL-85-1
breast
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R228S
SIDM00537
Colorectal Carcinoma
GDSC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R228S
GP5d
large_intestine
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.0556
p.V245A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P239L
CAL-85-1
breast
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.6471
p.Q250K
NCI-H727
lung
COSMIC
KPSLFSD
LIG_APCC_ABBAyCdc20_2
0.1667
Drug responses associated with RUNX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KPSLFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13950
Runt-related transcription factor 2
LIG_APCC_ABBAyCdc20_2
238:244
KPSLFSD
APC,CDC20,FZR1
0.8937
More...