DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRAALGRMC
Uniprot ID:
Q9BZE4
Source protein:
GTP-binding protein 4
Source gene:
GTPBP4
Class:
DEG_APCC_DBOX_1
Location:
130:138
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6247
ASA_SCORE:
67.5667
COIL:
0.2692
CONS_SCORE:
0.5478
DSS_SCORE:
0.117
HELIX:
0.7214
FCONS_SCORE:
1.2695
RIG_SCORE:
0.8444
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R131C
TCGA-2W-A8YY
CESC
TCGA
KRAALGRMC
DEG_APCC_DBOX_1
0.8301
p.R125H
TCGA-AG-3731
READ
TCGA
KRAALGRMC
DEG_APCC_DBOX_1
0.1944
p.R125H
SIDM00487
Colorectal Carcinoma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.1944
p.R125H
ACH-000963
Colon/Colorectal Cancer
CCLE
KRAALGRMC
DEG_APCC_DBOX_1
0.1944
p.R125H
CCK-81
large_intestine
COSMIC
KRAALGRMC
DEG_APCC_DBOX_1
0.1944
p.R131H
TCGA-B5-A1MV
UCEC
TCGA
KRAALGRMC
DEG_APCC_DBOX_1
0.8244
p.R131H
SIDM00881
Breast Carcinoma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.8244
p.R131H
HCC1428
breast
COSMIC
KRAALGRMC
DEG_APCC_DBOX_1
0.8244
p.M137I
TCGA-CR-7404
HNSC
TCGA
KRAALGRMC
DEG_APCC_DBOX_1
0.6507
p.M137I
SIDM00720
Mesothelioma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.6507
p.M137I
ACH-000648
Lung Cancer
CCLE
KRAALGRMC
DEG_APCC_DBOX_1
0.6507
p.M137I
NCI-H28
pleura
COSMIC
KRAALGRMC
DEG_APCC_DBOX_1
0.6507
p.R132C
DO227987
COCA
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.8301
p.R132C
DO45127
LIRI
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.8301
p.R132C
DO37406
SKCM
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.8301
p.R132C
DO51301
SKCM
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.8301
p.G146V
DO229015
LICA
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.1111
p.L141F
DO231104
LUSC
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.25
p.R132S
DO47509
SKCM
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.7427
p.R132L
DO39756
THCA
ICGC
KRAALGRMC
DEG_APCC_DBOX_1
0.8428
p.K142N
SIDM00723
Non-Small Cell Lung Carcinoma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.6667
p.A132V
SIDM00680
Colorectal Carcinoma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.5825
p.A132V
ACH-000957
Colon/Colorectal Cancer
CCLE
KRAALGRMC
DEG_APCC_DBOX_1
0.5825
p.A132V
LS-180
large_intestine
COSMIC
KRAALGRMC
DEG_APCC_DBOX_1
0.5825
p.D121N
SIDM01588
Endometrial Carcinoma
GDSC
KRAALGRMC
DEG_APCC_DBOX_1
0.0833
p.D121N
ACH-000993
Endometrial/Uterine Cancer
CCLE
KRAALGRMC
DEG_APCC_DBOX_1
0.0833
Drug responses associated with GTPBP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRAALGRMC
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BZE4
GTP-binding protein 4
DEG_APCC_DBOX_1
130:138
KRAALGRMC
APC,CDC20,FZR1
0.6247
More...