DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRENLNEVV
Uniprot ID:
Q7Z3D4
Source protein:
LysM and putative peptidoglycan-binding domain-containing protein 3
Source gene:
LYSMD3
Class:
DEG_APCC_DBOX_1
Location:
178:186
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5966
ASA_SCORE:
93.8889
COIL:
0.3841
CONS_SCORE:
0.4823
DSS_SCORE:
0.3646
HELIX:
0.592
FCONS_SCORE:
1.097
RIG_SCORE:
0.791
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q192H
TCGA-22-1000
LUSC
TCGA
KRENLNEVV
DEG_APCC_DBOX_1
0.1667
p.Q192H
DO27060
LUSC
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.1667
p.S187L
TCGA-2J-AABT
PAAD
TCGA
KRENLNEVV
DEG_APCC_DBOX_1
0.3056
p.S187L
DO222595
MELA
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.3056
p.S187L
DO51670
PAAD
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.3056
p.V186L
TCGA-BA-A4II
HNSC
TCGA
KRENLNEVV
DEG_APCC_DBOX_1
0.5654
p.V186L
DO52030
HNSC
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.5654
p.T175A
TCGA-BS-A0UV
UCEC
TCGA
KRENLNEVV
DEG_APCC_DBOX_1
0.25
p.T175A
DO42793
UCEC
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.25
p.E180D
TCGA-EE-A3AD
SKCM
TCGA
KRENLNEVV
DEG_APCC_DBOX_1
0.5647
p.E180D
DO37707
SKCM
ICGC
KRENLNEVV
DEG_APCC_DBOX_1
0.5647
p.T190R
SIDM00582
Pancreatic Carcinoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.2222
p.T190R
ACH-000281
Pancreatic Cancer
CCLE
KRENLNEVV
DEG_APCC_DBOX_1
0.2222
p.T190R
KP-2
pancreas
COSMIC
KRENLNEVV
DEG_APCC_DBOX_1
0.2222
p.M194L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
p.M194L
SIDM00032
Bladder Carcinoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
p.M194L
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
p.M194L
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
p.M194L
SIDM00808
Burkitt's Lymphoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
p.M194L
SIDM01254
Burkitt's Lymphoma
GDSC
KRENLNEVV
DEG_APCC_DBOX_1
0.1111
Drug responses associated with LYSMD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRENLNEVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z3D4
LysM and putative peptidoglycan-binding domain-containing protein 3
DEG_APCC_DBOX_1
178:186
KRENLNEVV
APC,CDC20,FZR1
0.5966
More...