DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRHNLAQVR
Uniprot ID:
Q5VST9
Source protein:
Obscurin
Source gene:
OBSCN
Class:
DEG_APCC_DBOX_1
Location:
7960:7968
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9745
ASA_SCORE:
125.8
COIL:
0.5341
CONS_SCORE:
0.2526
DSS_SCORE:
0.6281
HELIX:
0.4488
FCONS_SCORE:
1.0009
RIG_SCORE:
0.8087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I7952M
TCGA-67-3771
LUAD
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.1111
p.G7956R
TCGA-AA-3492
COAD
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.2222
p.G7956R
TCGA-EE-A2GC
SKCM
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.2222
p.T7967A
TCGA-D3-A8GP
SKCM
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.7139
p.P7958T
TCGA-D9-A1X3
SKCM
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.P7958T
SIDM01617
Endometrial Carcinoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.P7958T
ACH-000994
Endometrial/Uterine Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.P7971Q
TCGA-ER-A19P
SKCM
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.25
p.H7957Y
TCGA-FI-A2D0
UCEC
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.25
p.H7957Y
DO43891
UCEC
ICGC
KRHNLAQVR
DEG_APCC_DBOX_1
0.25
p.G7968R
TCGA-KU-A66S
HNSC
TCGA
KRHNLAQVR
DEG_APCC_DBOX_1
0.7568
p.G7968R
DO44456
HNSC
ICGC
KRHNLAQVR
DEG_APCC_DBOX_1
0.7568
p.A7950G
SIDM01090
Colorectal Carcinoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.0556
p.E7977K
SIDM01174
Cervical Carcinoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.0833
p.E7977K
ACH-001402
Cervical Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.0833
p.E7977K
SW756
cervix
COSMIC
KRHNLAQVR
DEG_APCC_DBOX_1
0.0833
p.A7974V
SIDM00846
Cervical Carcinoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.1667
p.A7974V
HeLa
cervix
COSMIC
KRHNLAQVR
DEG_APCC_DBOX_1
0.1667
p.P7958S
SIDM01228
Melanoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.P7958S
ACH-001024
Skin Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.P7958S
CHL-1
skin
COSMIC
KRHNLAQVR
DEG_APCC_DBOX_1
0.2778
p.G7968A
SIDM01503
Small Cell Lung Carcinoma
GDSC
KRHNLAQVR
DEG_APCC_DBOX_1
0.754
p.G7968A
ACH-000844
Lung Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.754
p.S7966T
ACH-000961
Endometrial/Uterine Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.7116
p.Q7975P
ACH-001645
Skin Cancer
CCLE
KRHNLAQVR
DEG_APCC_DBOX_1
0.1389
Drug responses associated with OBSCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRHNLAQVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VST9
Obscurin
DEG_APCC_DBOX_1
7960:7968
KRHNLAQVR
APC,CDC20,FZR1
0.9745
More...