DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRKRLGELF
Uniprot ID:
P05060
Source protein:
Secretogranin-1
Source gene:
CHGB
Class:
DEG_APCC_DBOX_1
Location:
514:522
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9877
ASA_SCORE:
109.8333
COIL:
0.6488
CONS_SCORE:
0.6753
DSS_SCORE:
0.4287
HELIX:
0.3007
FCONS_SCORE:
1.1036
RIG_SCORE:
0.7228
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H510N
TCGA-CC-5258
LIHC
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.H510N
DO22881
LIHC
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.H510Y
TCGA-D3-A51R
SKCM
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.H510Y
TCGA-FD-A3SS
BLCA
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.H510Y
DO737
BLCA
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.H510Y
DO47480
SKCM
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.2222
p.Q530K
TCGA-DA-A1I1
SKCM
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.1111
p.Q530K
DO37966
SKCM
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.1111
p.L529V
TCGA-IG-A3Y9
ESCA
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.1389
p.H509N
TCGA-OR-A5KB
ACC
TCGA
KRKRLGELF
DEG_APCC_DBOX_1
0.1944
p.A512D
DO234257
ESAD
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.2778
p.K516M
DO48316
ESCA
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.6951
p.S507C
DO45095
LIRI
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.1389
p.S508F
DO222843
MELA
ICGC
KRKRLGELF
DEG_APCC_DBOX_1
0.1667
p.H509Q
SIDM00946
T-Lymphoblastic Leukemia
GDSC
KRKRLGELF
DEG_APCC_DBOX_1
0.1944
p.G519V
SIDM00819
Kidney Carcinoma
GDSC
KRKRLGELF
DEG_APCC_DBOX_1
0.6421
p.G519V
ACH-002189
Kidney Cancer
CCLE
KRKRLGELF
DEG_APCC_DBOX_1
0.6421
p.G519V
RCC-FG2
kidney
COSMIC
KRKRLGELF
DEG_APCC_DBOX_1
0.6421
p.K504E
SIDM01686
Chronic Myelogenous Leukemia
GDSC
KRKRLGELF
DEG_APCC_DBOX_1
0.1667
Drug responses associated with CHGB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRKRLGELF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P05060
Secretogranin-1
DEG_APCC_DBOX_1
514:522
KRKRLGELF
APC,CDC20,FZR1
0.9877
More...