DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRNNLIPIV
Uniprot ID:
Q2Y0W8
Source protein:
Electroneutral sodium bicarbonate exchanger 1
Source gene:
SLC4A8
Class:
DEG_APCC_DBOX_1
Location:
227:235
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9551
ASA_SCORE:
100.3111
COIL:
0.811
CONS_SCORE:
0.2094
DSS_SCORE:
0.5357
HELIX:
0.1074
FCONS_SCORE:
0.9223
RIG_SCORE:
0.7595
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q223P
TCGA-46-3769
LUSC
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.2222
p.K219N
TCGA-69-7979
LUAD
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.2222
p.K226N
TCGA-AG-A002
READ
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236C
TCGA-AP-A1DV
UCEC
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236C
TCGA-FW-A3R5
SKCM
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236H
TCGA-AX-A2HD
UCEC
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236H
ACH-001991
Primary
CCLE
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.K227N
TCGA-B6-A0IJ
BRCA
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.5806
p.Q223H
TCGA-CA-6717
COAD
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.2222
p.H222Y
TCGA-W3-AA1R
SKCM
TCGA
KRNNLIPIV
DEG_APCC_DBOX_1
0.1944
p.E224K
DO218984
BLCA
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.25
p.I241V
DO219694
KIRP
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1667
p.A245S
DO229026
LICA
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.0556
p.P227F
DO222420
MELA
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.7897
p.P242S
DO222875
MELA
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1389
p.P242S
DO37603
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1389
p.P242S
DO37571
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1389
p.M238I
DO37611
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.25
p.M238I
DO47281
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.25
p.M238I
DO48601
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.25
p.P227H
DO37715
SKCM
ICGC
KRNNLIPIV
DEG_APCC_DBOX_1
0.7694
p.V241A
SIDM01175
Other Sarcomas
GDSC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1667
p.V241A
ACH-002309
Sarcoma
CCLE
KRNNLIPIV
DEG_APCC_DBOX_1
0.1667
p.V241A
SW684
soft_tissue
COSMIC
KRNNLIPIV
DEG_APCC_DBOX_1
0.1667
p.R236L
SIDM00592
Oral Cavity Carcinoma
GDSC
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236L
ACH-002244
Head and Neck Cancer
CCLE
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.R236L
HO-1-N-1
salivary_gland
COSMIC
KRNNLIPIV
DEG_APCC_DBOX_1
0.3056
p.F237L
A431
skin
COSMIC
KRNNLIPIV
DEG_APCC_DBOX_1
0.7222
p.F237L
HCC1937
breast
COSMIC
KRNNLIPIV
DEG_APCC_DBOX_1
0.7222
Drug responses associated with SLC4A8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRNNLIPIV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2Y0W8
Electroneutral sodium bicarbonate exchanger 1
DEG_APCC_DBOX_1
227:235
KRNNLIPIV
APC,CDC20,FZR1
0.9551
More...