DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRQDLLNVL
Uniprot ID:
Q96A33
Source protein:
PAT complex subunit CCDC47
Source gene:
CCDC47
Class:
DEG_APCC_DBOX_1
Location:
226:234
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6252
ASA_SCORE:
27.8
COIL:
0.347
CONS_SCORE:
0.5363
DSS_SCORE:
0.041
HELIX:
0.5929
FCONS_SCORE:
1.3216
RIG_SCORE:
0.9258
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M237I
TCGA-CF-A9FF
BLCA
TCGA
KRQDLLNVL
DEG_APCC_DBOX_1
0.25
p.M237I
DO218999
BLCA
ICGC
KRQDLLNVL
DEG_APCC_DBOX_1
0.25
p.M218I
TCGA-MA-AA3Y
CESC
TCGA
KRQDLLNVL
DEG_APCC_DBOX_1
0.1111
p.M218I
DO219721
CESC
ICGC
KRQDLLNVL
DEG_APCC_DBOX_1
0.1111
p.Q228K
DO229041
LICA
ICGC
KRQDLLNVL
DEG_APCC_DBOX_1
0.5833
p.V241L
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
KRQDLLNVL
DEG_APCC_DBOX_1
0.1389
p.V241L
ACH-000951
Lung Cancer
CCLE
KRQDLLNVL
DEG_APCC_DBOX_1
0.1389
p.V241L
NCI-H2342
lung
COSMIC
KRQDLLNVL
DEG_APCC_DBOX_1
0.1389
Drug responses associated with CCDC47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRQDLLNVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96A33
PAT complex subunit CCDC47
DEG_APCC_DBOX_1
226:234
KRQDLLNVL
APC,CDC20,FZR1
0.6252
More...