DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRQRLPSVE
Uniprot ID:
O15417
Source protein:
Trinucleotide repeat-containing gene 18 protein
Source gene:
TNRC18
Class:
DEG_APCC_DBOX_1
Location:
2765:2773
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7157
ASA_SCORE:
104.8444
COIL:
0.656
CONS_SCORE:
0.4088
DSS_SCORE:
0.5345
HELIX:
0.3316
FCONS_SCORE:
0.9026
RIG_SCORE:
0.7422
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N2774S
TCGA-B7-5816
STAD
TCGA
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
DO38599
STAD
ICGC
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
SIDM00480
Ovarian Carcinoma
GDSC
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
SIDM01088
Endometrial Carcinoma
GDSC
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
ACH-000704
Ovarian Cancer
CCLE
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
ACH-000965
Endometrial/Uterine Cancer
CCLE
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
OAW-42
ovary
COSMIC
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.N2774S
RL95-2
endometrium
COSMIC
KRQRLPSVE
DEG_APCC_DBOX_1
0.3056
p.A2780T
TCGA-DI-A0WH
UCEC
TCGA
KRQRLPSVE
DEG_APCC_DBOX_1
0.1389
p.A2780T
DO43843
UCEC
ICGC
KRQRLPSVE
DEG_APCC_DBOX_1
0.1389
p.R2766Q
TCGA-EC-A24G
UCEC
TCGA
KRQRLPSVE
DEG_APCC_DBOX_1
0.7329
p.R2766Q
DO40996
UCEC
ICGC
KRQRLPSVE
DEG_APCC_DBOX_1
0.7329
p.R2775W
TCGA-EO-A22U
UCEC
TCGA
KRQRLPSVE
DEG_APCC_DBOX_1
0.2778
p.R2775W
DO43755
UCEC
ICGC
KRQRLPSVE
DEG_APCC_DBOX_1
0.2778
p.A2779T
TCGA-FI-A2D0
UCEC
TCGA
KRQRLPSVE
DEG_APCC_DBOX_1
0.1667
p.A2779T
DO43891
UCEC
ICGC
KRQRLPSVE
DEG_APCC_DBOX_1
0.1667
p.R2768H
ACH-000928
Endometrial/Uterine Cancer
CCLE
KRQRLPSVE
DEG_APCC_DBOX_1
0.7133
Drug responses associated with TNRC18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRQRLPSVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15417
Trinucleotide repeat-containing gene 18 protein
DEG_APCC_DBOX_1
2765:2773
KRQRLPSVE
APC,CDC20,FZR1
0.7157
More...