DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KRRHLGTLL
Uniprot ID:
Q9P1Z3
Source protein:
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
Source gene:
HCN3
Class:
DEG_APCC_DBOX_1
Location:
45:53
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8995
ASA_SCORE:
67.8222
COIL:
0.2598
CONS_SCORE:
0.4304
DSS_SCORE:
0.6232
HELIX:
0.7203
FCONS_SCORE:
1.031
RIG_SCORE:
0.7036
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S40F
TCGA-B5-A3FC
UCEC
TCGA
KRRHLGTLL
DEG_APCC_DBOX_1
0.1944
p.S40F
DO41871
UCEC
ICGC
KRRHLGTLL
DEG_APCC_DBOX_1
0.1944
p.R63G
TCGA-FD-A62P
BLCA
TCGA
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63G
DO44054
BLCA
ICGC
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
TCGA-FD-A6TC
BLCA
TCGA
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
TCGA-G2-A2ES
BLCA
TCGA
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
TCGA-LN-A4A8
ESCA
TCGA
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
DO49755
BLCA
ICGC
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
DO785
BLCA
ICGC
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R63W
ACH-000854
Myeloma
CCLE
KRRHLGTLL
DEG_APCC_DBOX_1
0.0556
p.R46K
SIDM00570
Gastric Carcinoma
GDSC
KRRHLGTLL
DEG_APCC_DBOX_1
0.7237
p.R46K
SIDM00377
Other Sarcomas
GDSC
KRRHLGTLL
DEG_APCC_DBOX_1
0.7237
p.R46K
SIDM01608
Endometrial Carcinoma
GDSC
KRRHLGTLL
DEG_APCC_DBOX_1
0.7237
p.R46K
SIDM01347
Ovarian Carcinoma
GDSC
KRRHLGTLL
DEG_APCC_DBOX_1
0.7237
p.K39N
ACH-001484
Leukemia
CCLE
KRRHLGTLL
DEG_APCC_DBOX_1
0.2778
p.K39N
ACH-001485
Leukemia
CCLE
KRRHLGTLL
DEG_APCC_DBOX_1
0.2778
p.P36T
ACH-001853
Bile Duct Cancer
CCLE
KRRHLGTLL
DEG_APCC_DBOX_1
0.0833
Drug responses associated with HCN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRRHLGTLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Z3
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
DEG_APCC_DBOX_1
45:53
KRRHLGTLL
APC,CDC20,FZR1
0.8995
More...