DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRSSLRKVK
Uniprot ID:
Q12829
Source protein:
Ras-related protein Rab-40B
Source gene:
RAB40B
Class:
DEG_APCC_DBOX_1
Location:
250:258
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.976
ASA_SCORE:
111.7667
COIL:
0.7122
CONS_SCORE:
0.3349
DSS_SCORE:
0.6718
HELIX:
0.212
FCONS_SCORE:
1.0377
RIG_SCORE:
0.7096
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S265I
TCGA-FI-A2D5
UCEC
TCGA
KRSSLRKVK
DEG_APCC_DBOX_1
0.1389
p.R261C
TCGA-HF-A5NB
STAD
TCGA
KRSSLRKVK
DEG_APCC_DBOX_1
0.25
p.R255H
DO233898
GACA
ICGC
KRSSLRKVK
DEG_APCC_DBOX_1
0.7133
p.R261S
DO229221
THCA
ICGC
KRSSLRKVK
DEG_APCC_DBOX_1
0.25
p.K256N
SIDM00516
Melanoma
GDSC
KRSSLRKVK
DEG_APCC_DBOX_1
0.5806
p.K256N
MZ7-mel
skin
COSMIC
KRSSLRKVK
DEG_APCC_DBOX_1
0.5806
Drug responses associated with RAB40B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRSSLRKVK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12829
Ras-related protein Rab-40B
DEG_APCC_DBOX_1
250:258
KRSSLRKVK
APC,CDC20,FZR1
0.976
More...