DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRTKLDDLA
Uniprot ID:
Q13523
Source protein:
Serine/threonine-protein kinase PRP4 homolog
Source gene:
PRPF4B
Class:
DEG_APCC_DBOX_1
Location:
96:104
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9854
ASA_SCORE:
89.9111
COIL:
0.4314
CONS_SCORE:
0.3842
DSS_SCORE:
0.433
HELIX:
0.5576
FCONS_SCORE:
0.9867
RIG_SCORE:
0.7833
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S87F
TCGA-A1-A0SH
BRCA
TCGA
KRTKLDDLA
DEG_APCC_DBOX_1
0.5278
p.S87F
DO1261
BRCA
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.5278
p.S93Y
TCGA-AG-A002
READ
TCGA
KRTKLDDLA
DEG_APCC_DBOX_1
0.6944
p.S93Y
DO234205
ESAD
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.6944
p.L109V
TCGA-CM-6674
COAD
TCGA
KRTKLDDLA
DEG_APCC_DBOX_1
0.1944
p.L109V
DO10092
COAD
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.1944
p.A114S
TCGA-DX-A6YV
SARC
TCGA
KRTKLDDLA
DEG_APCC_DBOX_1
0.0556
p.A114S
DO220011
SARC
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.0556
p.E96K
DO225124
BRCA
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.7022
p.D107H
DO6128
BRCA
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.25
p.M111I
DO228974
LICA
ICGC
KRTKLDDLA
DEG_APCC_DBOX_1
0.5833
p.K89E
SIDM00262
Ewing's Sarcoma
GDSC
KRTKLDDLA
DEG_APCC_DBOX_1
0.25
p.K89E
ACH-002107
Bone Cancer
CCLE
KRTKLDDLA
DEG_APCC_DBOX_1
0.25
p.K89E
ES6
bone
COSMIC
KRTKLDDLA
DEG_APCC_DBOX_1
0.25
p.R113K
SIDM00032
Bladder Carcinoma
GDSC
KRTKLDDLA
DEG_APCC_DBOX_1
0.0833
p.R113K
ACH-000839
Bladder Cancer
CCLE
KRTKLDDLA
DEG_APCC_DBOX_1
0.0833
p.R113K
SCaBER
urinary_tract
COSMIC
KRTKLDDLA
DEG_APCC_DBOX_1
0.0833
Drug responses associated with PRPF4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRTKLDDLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13523
Serine/threonine-protein kinase PRP4 homolog
DEG_APCC_DBOX_1
96:104
KRTKLDDLA
APC,CDC20,FZR1
0.9854
More...