DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KRVVFLE
Uniprot ID:
Q86SJ2
Source protein:
Amphoterin-induced protein 2
Source gene:
AMIGO2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
464:470
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8335
ASA_SCORE:
60.6714
COIL:
0.6341
CONS_SCORE:
0.7252
DSS_SCORE:
0.4023
HELIX:
0.0497
FCONS_SCORE:
1.2565
RIG_SCORE:
0.8206
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A455T
TCGA-43-8118
LUSC
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A455T
DO223045
ESCA
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A455T
DO45471
LUSC
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A477T
TCGA-AN-A0FJ
BRCA
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A477T
DO5060
BRCA
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R458Q
TCGA-BR-8368
STAD
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R458Q
DO47981
STAD
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.G478E
TCGA-BS-A0UF
UCEC
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G478E
DO41488
UCEC
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.S454F
TCGA-CC-A7IJ
LIHC
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.S454F
DO52183
LIHC
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.S454F
SIDM02066
Colorectal Carcinoma
GDSC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.A455D
TCGA-DX-A6YV
SARC
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A455D
DO220011
SARC
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R465I
TCGA-EE-A2GN
SKCM
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6991
p.R465I
DO37896
SKCM
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6991
p.F468S
TCGA-ER-A19J
SKCM
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.7982
p.F468S
DO37426
SKCM
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.7982
p.R465K
TCGA-FR-A726
SKCM
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6126
p.R465K
DO48665
SKCM
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6126
p.R465S
TCGA-P5-A5EU
LGG
TCGA
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6316
p.R465S
DO50159
LGG
ICGC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.6316
p.G478V
SIDM00195
Ewing's Sarcoma
GDSC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G478V
ACH-002117
Bone Cancer
CCLE
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G478V
EW-24
bone
COSMIC
KRVVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with AMIGO2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRVVFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86SJ2
Amphoterin-induced protein 2
LIG_APCC_ABBAyCdc20_2
464:470
KRVVFLE
APC,CDC20,FZR1
0.8335
More...