DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KRYLLIGLA
Uniprot ID:
Q5TGY1
Source protein:
Transmembrane and coiled-coil domain-containing protein 4
Source gene:
TMCO4
Class:
DEG_APCC_DBOX_1
Location:
188:196
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8088
ASA_SCORE:
74.5333
COIL:
0.3497
CONS_SCORE:
0.5446
DSS_SCORE:
0.1108
HELIX:
0.5372
FCONS_SCORE:
1.1886
RIG_SCORE:
0.906
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R178Q
TCGA-05-4389
LUAD
TCGA
KRYLLIGLA
DEG_APCC_DBOX_1
0.0556
p.R178Q
DO24307
LUAD
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.0556
p.R178Q
DO232635
PBCA
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.0556
p.R178Q
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
KRYLLIGLA
DEG_APCC_DBOX_1
0.0556
p.R178Q
ACH-000925
Lung Cancer
CCLE
KRYLLIGLA
DEG_APCC_DBOX_1
0.0556
p.L195M
TCGA-AP-A1DK
UCEC
TCGA
KRYLLIGLA
DEG_APCC_DBOX_1
0.5999
p.L195M
DO42033
UCEC
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.5999
p.R184W
TCGA-F4-6463
COAD
TCGA
KRYLLIGLA
DEG_APCC_DBOX_1
0.2222
p.R184W
DO7958
COAD
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.2222
p.R184W
SIDM00529
Breast Carcinoma
GDSC
KRYLLIGLA
DEG_APCC_DBOX_1
0.2222
p.R184W
SIDM00431
T-Lymphoblastic Leukemia
GDSC
KRYLLIGLA
DEG_APCC_DBOX_1
0.2222
p.R184W
SIDM01318
Hepatocellular Carcinoma
GDSC
KRYLLIGLA
DEG_APCC_DBOX_1
0.2222
p.T202M
TCGA-KK-A6E8
PRAD
TCGA
KRYLLIGLA
DEG_APCC_DBOX_1
0.1667
p.T202M
TCGA-LA-A7SW
LUSC
TCGA
KRYLLIGLA
DEG_APCC_DBOX_1
0.1667
p.T202M
DO52024
LUSC
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.1667
p.T202M
DO51364
PRAD
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.1667
p.R189H
DO230335
COCA
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.8244
p.G205D
DO233088
GACA
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.0833
p.L191F
DO220857
MELA
ICGC
KRYLLIGLA
DEG_APCC_DBOX_1
0.587
Drug responses associated with TMCO4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KRYLLIGLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TGY1
Transmembrane and coiled-coil domain-containing protein 4
DEG_APCC_DBOX_1
188:196
KRYLLIGLA
APC,CDC20,FZR1
0.8088
More...