DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KSALFSE
Uniprot ID:
Q96JM3
Source protein:
Chromosome alignment-maintaining phosphoprotein 1
Source gene:
CHAMP1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
565:571
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9978
ASA_SCORE:
94.8143
COIL:
0.8584
CONS_SCORE:
0.6946
DSS_SCORE:
0.3703
HELIX:
0.128
FCONS_SCORE:
1.1301
RIG_SCORE:
0.7254
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G579S
TCGA-AF-3914
READ
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G579S
DO36475
READ
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E577Q
TCGA-AO-A12D
BRCA
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E577Q
DO4707
BRCA
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.L568I
TCGA-AX-A2HC
UCEC
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.6063
p.L568I
DO41572
UCEC
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.6063
p.R555W
TCGA-AX-A2HD
UCEC
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R555W
DO42608
UCEC
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.G579D
TCGA-EO-A22U
UCEC
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G579D
DO43755
UCEC
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.L568V
TCGA-YL-A9WK
PRAD
TCGA
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
DO51443
PRAD
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
SIDM00018
Acute Myeloid Leukemia
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
SIDM00540
Oral Cavity Carcinoma
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
SIDM00381
Cervical Carcinoma
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
SIDM01577
Plasma Cell Myeloma
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L568V
SIDM01472
Hepatocellular Carcinoma
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.5654
p.P564S
DO220873
MELA
ICGC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.S570L
SIDM01587
Bladder Carcinoma
GDSC
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S570L
ACH-000753
Bladder Cancer
CCLE
KSALFSE
LIG_APCC_ABBAyCdc20_2
0.7667
Drug responses associated with CHAMP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KSALFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JM3
Chromosome alignment-maintaining phosphoprotein 1
LIG_APCC_ABBAyCdc20_2
565:571
KSALFSE
APC,CDC20,FZR1
0.9978
More...