DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KTIVFVE
Uniprot ID:
P17844
Source protein:
Probable ATP-dependent RNA helicase DDX5
Source gene:
DDX5
Class:
LIG_APCC_ABBAyCdc20_2
Location:
343:349
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8526
ASA_SCORE:
20.3429
COIL:
0.266
CONS_SCORE:
0.7102
DSS_SCORE:
0.3338
HELIX:
0.0153
FCONS_SCORE:
1.4028
RIG_SCORE:
0.8848
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D355H
TCGA-B8-A54E
KIRC
TCGA
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.1667
p.D355H
DO50478
KIRC
ICGC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.1667
p.T350S
DO222880
MELA
ICGC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R352G
DO231284
PACA
ICGC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.25
p.K343T
SIDM00534
Colorectal Carcinoma
GDSC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.7306
p.K343T
ACH-000986
Colon/Colorectal Cancer
CCLE
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.7306
p.K343T
HT-115
large_intestine
COSMIC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.7306
p.I347V
HCC1569
breast
COSMIC
KTIVFVE
LIG_APCC_ABBAyCdc20_2
0.7076
Drug responses associated with DDX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KTIVFVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17844
Probable ATP-dependent RNA helicase DDX5
LIG_APCC_ABBAyCdc20_2
343:349
KTIVFVE
APC,CDC20,FZR1
0.8526
More...