DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KTRLYVD
Uniprot ID:
Q8NFJ9
Source protein:
Bardet-Biedl syndrome 1 protein
Source gene:
BBS1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
430:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.75
ASA_SCORE:
75.7857
COIL:
0.3831
CONS_SCORE:
0.6177
DSS_SCORE:
0.3849
HELIX:
0.561
FCONS_SCORE:
1.2327
RIG_SCORE:
0.8344
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q421H
TCGA-AD-6964
COAD
TCGA
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.0833
p.Q421H
DO8360
COAD
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.0833
p.N426I
TCGA-AP-A051
UCEC
TCGA
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.N426I
DO42673
UCEC
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R440Q
TCGA-AZ-6601
COAD
TCGA
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R440Q
DO8119
COAD
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.M423I
TCGA-GR-A4D4
DLBC
TCGA
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.1389
p.M423I
DO219907
DLBC
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P443L
DO5535
BRCA
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.1389
p.V442L
DO229025
LICA
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.1667
p.V442L
DO229045
LICA
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.1667
p.N426S
DO35270
PACA
ICGC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.K430N
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.6918
p.K430N
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.6918
p.P434L
HDQ-P1
breast
COSMIC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.7582
p.R435L
SK-GT-2
stomach
COSMIC
KTRLYVD
LIG_APCC_ABBAyCdc20_2
0.8428
Drug responses associated with BBS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KTRLYVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFJ9
Bardet-Biedl syndrome 1 protein
LIG_APCC_ABBAyCdc20_2
430:436
KTRLYVD
APC,CDC20,FZR1
0.75
More...