DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KVKVHLD
Uniprot ID:
O75339
Source protein:
Cartilage intermediate layer protein 1
Source gene:
CILP
Class:
LIG_APCC_ABBAyCdc20_2
Location:
677:683
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7257
ASA_SCORE:
62.8286
COIL:
0.3366
CONS_SCORE:
0.69
DSS_SCORE:
0.3967
HELIX:
0.0149
FCONS_SCORE:
1.1198
RIG_SCORE:
0.8031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T669I
TCGA-AJ-A3OL
UCEC
TCGA
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T669I
DO43001
UCEC
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.K688N
TCGA-EO-A3B0
UCEC
TCGA
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.K688N
DO219773
UCEC
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.Q686H
TCGA-F4-6461
COAD
TCGA
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.Q686H
DO10662
COAD
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.Q686H
ACH-001610
Brain Cancer
CCLE
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.Q686K
TCGA-FR-A8YC
SKCM
TCGA
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.Q686K
DO50301
SKCM
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.S684L
TCGA-G4-6588
COAD
TCGA
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.S684L
DO10140
COAD
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.S684L
DO222662
MELA
ICGC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.V678M
SIDM00557
Neuroblastoma
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V678M
SIDM00939
Non-Small Cell Lung Carcinoma
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V678M
SIDM00640
Mesothelioma
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V678M
SIDM01756
Chronic Myelogenous Leukemia
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.6097
p.V678M
SIDM01763
Rhabdomyosarcoma
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.6097
p.T669P
SIDM00129
Melanoma
GDSC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T669P
ACH-002121
Skin Cancer
CCLE
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T669P
G-MEL
skin
COSMIC
KVKVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with CILP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KVKVHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75339
Cartilage intermediate layer protein 1
LIG_APCC_ABBAyCdc20_2
677:683
KVKVHLD
APC,CDC20,FZR1
0.7257
More...