DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KVSLHFD
Uniprot ID:
Q9NQC1
Source protein:
E3 ubiquitin-protein ligase Jade-2
Source gene:
JADE2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
740:746
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5019
ASA_SCORE:
97.9571
COIL:
0.8359
CONS_SCORE:
0.4364
DSS_SCORE:
0.5907
HELIX:
0.0787
FCONS_SCORE:
1.0325
RIG_SCORE:
0.7202
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V735M
TCGA-DF-A2KU
UCEC
TCGA
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.1944
p.P731Q
TCGA-FS-A1ZC
SKCM
TCGA
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.0833
p.E737D
TCGA-IR-A3LK
CESC
TCGA
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.25
p.R756H
SIDM02072
Colorectal Carcinoma
GDSC
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.A744T
SIDM00905
Cervical Carcinoma
GDSC
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.7139
p.A744T
C-4-I
cervix
COSMIC
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.7139
p.D756G
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.D755G
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
KVSLHFD
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with JADE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KVSLHFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQC1
E3 ubiquitin-protein ligase Jade-2
LIG_APCC_ABBAyCdc20_2
740:746
KVSLHFD
APC,CDC20,FZR1
0.5019
More...