DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KVVVHQE
Uniprot ID:
P11171
Source protein:
Protein 4.1
Source gene:
EPB41
Class:
LIG_APCC_ABBAyCdc20_2
Location:
852:858
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9622
ASA_SCORE:
83.2286
COIL:
0.2096
CONS_SCORE:
0.553
DSS_SCORE:
0.564
HELIX:
0.0123
FCONS_SCORE:
1.0733
RIG_SCORE:
0.8053
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E860K
TCGA-A5-A0G2
UCEC
TCGA
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.2778
p.Q857K
TCGA-D3-A2JC
SKCM
TCGA
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.5833
p.D863G
SIDM01664
Prostate Carcinoma
GDSC
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D863G
ACH-000952
Prostate Cancer
CCLE
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K852N
SIDM01494
Glioblastoma
GDSC
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.6918
p.K852N
ACH-000445
Brain Cancer
CCLE
KVVVHQE
LIG_APCC_ABBAyCdc20_2
0.6918
Drug responses associated with EPB41 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KVVVHQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11171
Protein 4.1
LIG_APCC_ABBAyCdc20_2
852:858
KVVVHQE
APC,CDC20,FZR1
0.9622
More...