DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KYGVFFD
Uniprot ID:
Q96GA3
Source protein:
Protein LTV1 homolog
Source gene:
LTV1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
57:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9976
ASA_SCORE:
70.5286
COIL:
0.7351
CONS_SCORE:
0.4459
DSS_SCORE:
0.3797
HELIX:
0.2166
FCONS_SCORE:
1.0094
RIG_SCORE:
0.7996
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D65Y
TCGA-22-4609
LUSC
TCGA
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D65Y
DO229018
LICA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D65Y
DO26838
LUSC
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.2778
p.K73N
TCGA-AP-A1DV
UCEC
TCGA
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.5
p.K73N
DO43186
UCEC
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.5
p.Y66C
TCGA-XF-A9ST
BLCA
TCGA
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.6944
p.Y66C
DO223599
BLCA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.6944
p.D47H
DO1172
BRCA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.0556
p.E49K
DO1110
BRCA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.N48S
DO223504
CLLE
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.0833
p.E49D
DO233885
GACA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L72Q
DO44858
LICA
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.0833
p.D63N
DO50805
LIRI
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.6932
p.K57T
DO50805
LIRI
ICGC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.7306
p.D64G
SIDM00121
T-Lymphoblastic Leukemia
GDSC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D64G
ACH-001738
Leukemia
CCLE
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D64G
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
KYGVFFD
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with LTV1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KYGVFFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96GA3
Protein LTV1 homolog
LIG_APCC_ABBAyCdc20_2
57:63
KYGVFFD
APC,CDC20,FZR1
0.9976
More...