DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KYNIHKD
Uniprot ID:
Q86UR5
Source protein:
Regulating synaptic membrane exocytosis protein 1
Source gene:
RIMS1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1321:1327
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6133
ASA_SCORE:
112.8714
COIL:
0.7851
CONS_SCORE:
0.359
DSS_SCORE:
0.4803
HELIX:
0.1806
FCONS_SCORE:
0.9437
RIG_SCORE:
0.7725
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1327N
TCGA-EY-A1H0
UCEC
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.6932
p.I1324M
TCGA-B5-A3FC
UCEC
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.6507
p.S1320F
TCGA-DD-A3A9
LIHC
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.3056
p.Q1328R
TCGA-FA-A86F
DLBC
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.3056
p.S1328P
SNU-1040
large_intestine
COSMIC
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.3056
p.I1317N
SW1783
central_nervous_system
COSMIC
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R1316C
TCGA-06-5416
GBM
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R1316C
SIDM01293
Colorectal Carcinoma
GDSC
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R1316H
TCGA-AZ-6606
COAD
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.1944
p.S1336F
ACH-001413
Bladder Cancer
CCLE
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.0833
p.S1312T
NCI-H2342
lung
COSMIC
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1336Q
SNG-M
endometrium
COSMIC
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.0833
p.A1337T
TCGA-D1-A1NZ
UCEC
TCGA
KYNIHKD
LIG_APCC_ABBAyCdc20_2
0.0556
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Drug responses associated with RIMS1 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of KYNIHKD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UR5
Regulating synaptic membrane exocytosis protein 1
LIG_APCC_ABBAyCdc20_2
1321:1327
KYNIHKD
APC,CDC20,FZR1
0.6133
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