DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KYPIFDD
Uniprot ID:
Q9P242
Source protein:
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2
Source gene:
NYAP2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
272:278
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5468
ASA_SCORE:
68.5429
COIL:
0.6864
CONS_SCORE:
0.7621
DSS_SCORE:
0.3235
HELIX:
0.2277
FCONS_SCORE:
1.1904
RIG_SCORE:
0.8423
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L279V
TCGA-37-3789
LUSC
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.L279V
DO26743
LUSC
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A283T
TCGA-AA-3672
COAD
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.A283T
DO9010
COAD
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.A283T
DO233259
GACA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.A283T
SIDM02041
Colorectal Carcinoma
GDSC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.A283V
TCGA-AA-A010
COAD
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D288N
TCGA-B5-A1MR
UCEC
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.D288N
DO41758
UCEC
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.L279F
TCGA-CV-A461
HNSC
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.L279F
DO49058
HNSC
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.Y273C
TCGA-D1-A15X
UCEC
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.5976
p.Y273C
DO43274
UCEC
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.5976
p.D278N
TCGA-E6-A1LX
UCEC
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
TCGA-EE-A2MD
SKCM
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
TCGA-EE-A2MR
SKCM
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
DO222434
MELA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
DO37851
SKCM
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
DO37819
SKCM
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.D278N
DO41020
UCEC
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.6932
p.E270A
TCGA-EE-A3J7
SKCM
TCGA
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E270A
DO48770
SKCM
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.Q263H
DO222884
COCA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0833
p.S264C
DO233702
GACA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1111
p.D282H
DO233897
GACA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2222
p.G280V
DO228938
LICA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.S264N
DO228291
MALY
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q263E
DO32916
PACA
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0833
p.A266T
DO38404
STAD
ICGC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D288E
SIDM00687
Gastric Carcinoma
GDSC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.D288E
ACH-000793
Gastric Cancer
CCLE
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.D288E
KATOIII
stomach
COSMIC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.0556
p.E270K
SIDM00003
Melanoma
GDSC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E270K
ACH-000884
Skin Cancer
CCLE
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E270K
ACH-002159
Skin Cancer
CCLE
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E270K
M14
skin
COSMIC
KYPIFDD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with NYAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KYPIFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P242
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2
LIG_APCC_ABBAyCdc20_2
272:278
KYPIFDD
APC,CDC20,FZR1
0.5468
More...