DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAETPAPE
Uniprot ID:
A6NDB9
Source protein:
Paralemmin-3
Source gene:
PALM3
Class:
DEG_SCF_FBW7_2
Location:
609:616
E3 ligase:
FBXW7
DEGRON score:
0.9146
ASA_SCORE:
96.6375
COIL:
0.9164
CONS_SCORE:
0.5081
DSS_SCORE:
0.7627
HELIX:
0.0461
FCONS_SCORE:
1.049
RIG_SCORE:
0.6612
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A614D
TCGA-BS-A0UJ
UCEC
TCGA
LAETPAPE
DEG_SCF_FBW7_2
0.6682
p.A614D
DO42745
UCEC
ICGC
LAETPAPE
DEG_SCF_FBW7_2
0.6682
p.E620K
DO222762
COCA
ICGC
LAETPAPE
DEG_SCF_FBW7_2
0.2222
p.E620K
ACH-000985
Colon/Colorectal Cancer
CCLE
LAETPAPE
DEG_SCF_FBW7_2
0.2222
p.A605V
ACH-001991
Primary
CCLE
LAETPAPE
DEG_SCF_FBW7_2
0.2222
p.P623S
DO10324
COAD
ICGC
LAETPAPE
DEG_SCF_FBW7_2
0.1389
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Drug responses associated with PALM3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LAETPAPE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDB9
Paralemmin-3
DEG_SCF_FBW7_2
609:616
LAETPAPE
FBXW7
0.9146
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