DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAKTPSSS
Uniprot ID:
O95996
Source protein:
Adenomatous polyposis coli protein 2
Source gene:
APC2
Class:
DEG_SCF_FBW7_1
Location:
1868:1875
E3 ligase:
FBXW7
DEGRON score:
0.988
ASA_SCORE:
103.0375
COIL:
0.9584
CONS_SCORE:
0.4755
DSS_SCORE:
0.8279
HELIX:
0.0241
FCONS_SCORE:
0.9812
RIG_SCORE:
0.5343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1873F
TCGA-78-7220
LUAD
TCGA
LAKTPSSS
DEG_SCF_FBW7_1
0.6871
p.S1873F
DO24409
LUAD
ICGC
LAKTPSSS
DEG_SCF_FBW7_1
0.6871
p.K1870N
TCGA-AA-A010
COAD
TCGA
LAKTPSSS
DEG_SCF_FBW7_1
0.5806
p.A1869V
DO233281
GACA
ICGC
LAKTPSSS
DEG_SCF_FBW7_1
0.5825
p.P1864T
DO229259
THCA
ICGC
LAKTPSSS
DEG_SCF_FBW7_1
0.2222
p.Q1878P
DO229253
THCA
ICGC
LAKTPSSS
DEG_SCF_FBW7_1
0.25
p.S1873P
DO229264
THCA
ICGC
LAKTPSSS
DEG_SCF_FBW7_1
0.5641
p.A1866T
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LAKTPSSS
DEG_SCF_FBW7_1
0.2778
p.P1859S
SIDM01587
Bladder Carcinoma
GDSC
LAKTPSSS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with APC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAKTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95996
Adenomatous polyposis coli protein 2
DEG_SCF_FBW7_1
1868:1875
LAKTPSSS
FBXW7
0.988
More...