DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LALFEE
Uniprot ID:
Q9UHW9
Source protein:
Solute carrier family 12 member 6
Source gene:
SLC12A6
Class:
LIG_APCC_ABBA_1
Location:
133:138
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9078
ASA_SCORE:
77.4167
COIL:
0.4765
CONS_SCORE:
0.3828
DSS_SCORE:
0.3676
HELIX:
0.4683
FCONS_SCORE:
1.1965
RIG_SCORE:
0.8296
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E138K
TCGA-18-3409
LUSC
TCGA
LALFEE
LIG_APCC_ABBA_1
0.7022
p.E137Q
TCGA-66-2742
LUSC
TCGA
LALFEE
LIG_APCC_ABBA_1
0.5633
p.N132H
TCGA-A5-A0G2
UCEC
TCGA
LALFEE
LIG_APCC_ABBA_1
0.3056
p.F136S
TCGA-A5-A0GP
UCEC
TCGA
LALFEE
LIG_APCC_ABBA_1
0.7982
p.E137K
TCGA-AR-A2LH
BRCA
TCGA
LALFEE
LIG_APCC_ABBA_1
0.591
p.E127K
TCGA-DR-A0ZM
CESC
TCGA
LALFEE
LIG_APCC_ABBA_1
0.1667
p.E127K
TCGA-HC-7077
PRAD
TCGA
LALFEE
LIG_APCC_ABBA_1
0.1667
p.R148H
DO219012
BLCA
ICGC
LALFEE
LIG_APCC_ABBA_1
0.5
p.R148C
DO223068
ESCA
ICGC
LALFEE
LIG_APCC_ABBA_1
0.5
p.Y133C
DO26548
LUSC
ICGC
LALFEE
LIG_APCC_ABBA_1
0.7087
p.T128I
DO232052
ORCA
ICGC
LALFEE
LIG_APCC_ABBA_1
0.6389
p.T128I
DO47337
SKCM
ICGC
LALFEE
LIG_APCC_ABBA_1
0.6389
p.M130I
DO47590
SKCM
ICGC
LALFEE
LIG_APCC_ABBA_1
0.25
p.M126R
DO41235
UCEC
ICGC
LALFEE
LIG_APCC_ABBA_1
0.1389
p.L145I
DO42713
UCEC
ICGC
LALFEE
LIG_APCC_ABBA_1
0.5833
Drug responses associated with SLC12A6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LALFEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHW9
Solute carrier family 12 member 6
LIG_APCC_ABBA_1
133:138
LALFEE
APC,CDC20,FZR1
0.9078
More...