DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPAAPTPPSVTV
Uniprot ID:
Q15772
Source protein:
Striated muscle preferentially expressed protein kinase
Source gene:
SPEG
Class:
DEG_ODPH_VHL_1
Location:
2807:2819
E3 ligase:
VHL
DEGRON score:
0.9645
ASA_SCORE:
80.9154
COIL:
0.9237
CONS_SCORE:
0.399
DSS_SCORE:
0.6781
HELIX:
0.023
FCONS_SCORE:
0.8263
RIG_SCORE:
0.5374
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2815L
TCGA-06-5416
GBM
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.6471
p.P2815L
TCGA-D3-A2J8
SKCM
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.6471
p.P2815L
DO10880
GBM
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.6471
p.P2815L
DO37778
SKCM
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.6471
p.L2803V
TCGA-AJ-A3EK
UCEC
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.2222
p.L2803V
DO41584
UCEC
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.2222
p.P2800S
TCGA-CR-7368
HNSC
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1389
p.P2800S
DO14167
HNSC
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1389
p.L2807R
TCGA-D3-A2JL
SKCM
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.8428
p.L2807R
DO47278
SKCM
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.8428
p.P2814T
TCGA-DM-A1DA
COAD
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
p.P2814T
DO7852
COAD
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
p.P2824S
TCGA-EE-A2MQ
SKCM
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1944
p.P2824S
DO37810
SKCM
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1944
p.P2824S
SIDM01161
Other Sarcomas
GDSC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1944
p.P2824S
ACH-001274
Sarcoma
CCLE
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1944
p.P2824S
SW982
soft_tissue
COSMIC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1944
p.S2822L
TCGA-ER-A193
SKCM
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.25
p.S2822L
DO47368
SKCM
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.25
p.P2812T
TCGA-F7-A61W
HNSC
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
p.P2812T
DO44434
HNSC
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
p.P2827L
TCGA-L9-A444
LUAD
TCGA
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1111
p.P2827L
DO26015
LUAD
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.1111
p.S2820R
DO227410
EOPC
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.3056
p.A2810V
DO228891
MALY
ICGC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5825
p.A2804T
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.25
p.P2809S
ACH-002508
Skin Cancer
CCLE
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.6752
p.T2813P
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
p.T2813P
EM-2
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAAPTPPSVTV
DEG_ODPH_VHL_1
0.5919
Drug responses associated with SPEG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPAAPTPPSVTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15772
Striated muscle preferentially expressed protein kinase
DEG_ODPH_VHL_1
2807:2819
LAPAAPTPPSVTV
VHL
0.9645
More...