DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPADEDELLPL
Uniprot ID:
E9PAV3
Source protein:
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
Source gene:
NACA
Class:
DEG_ODPH_VHL_1
Location:
1832:1843
E3 ligase:
VHL
DEGRON score:
0.9755
ASA_SCORE:
88.7
COIL:
0.8355
CONS_SCORE:
0.5579
DSS_SCORE:
0.5623
HELIX:
0.151
FCONS_SCORE:
1.1381
RIG_SCORE:
0.7097
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1852A
DO44042
BLCA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.0833
p.A1835V
DO8151
COAD
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.5825
p.L1841P
DO229010
COCA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7582
p.L1841P
DO229016
COCA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7582
p.L1841P
DO229003
COCA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7582
p.L1841P
DO229005
COCA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7582
p.L1841P
DO52365
LUSC
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7582
p.P1846L
DO234305
ESAD
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.25
p.P1846L
DO51761
STAD
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.25
p.P1846L
ACH-002222
Leukemia
CCLE
LAPADEDELLPL
DEG_ODPH_VHL_1
0.25
p.P1846L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.25
p.P1828H
DO229022
LICA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.2222
p.P1846S
DO232832
NACA
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.25
p.S1850F
DO51282
SKCM
ICGC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.1389
p.G1851R
ACH-000995
Leukemia
CCLE
LAPADEDELLPL
DEG_ODPH_VHL_1
0.1111
p.G1851R
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.1111
p.A1833T
LCLC-103H
lung
COSMIC
LAPADEDELLPL
DEG_ODPH_VHL_1
0.7139
Drug responses associated with NACA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPADEDELLPL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_ODPH_VHL_1
1832:1843
LAPADEDELLPL
VHL
0.9755
More...